SMAD7 (SMAD family member 7)

symbol:
SMAD7
locus group:
protein-coding gene
location:
18q21.1
gene_family:
SMAD family
alias symbol:
None
alias name:
None
entrez id:
4092
ensembl gene id:
ENSG00000101665
ucsc gene id:
uc002ldg.3
refseq accession:
NM_005904
hgnc_id:
HGNC:6773
approved reserved:
1997-08-22
18q21.1
基因染色体位置图

SMAD7属于SMAD基因家族,该家族是一组参与转化生长因子-β(TGF-β)信号通路的调控蛋白,主要功能是介导细胞对TGF-β超家族细胞因子的响应。SMAD家族成员可分为三类:受体调节型SMADs(R-SMADs)、共同介质SMAD(Co-SMAD)和抑制型SMADs(I-SMADs)。SMAD7属于抑制型SMADs,其主要作用是负调控TGF-β信号通路。SMAD7通过竞争性结合活化的TGF-β受体,阻止R-SMADs(如SMAD2和SMAD3)的磷酸化和激活,从而抑制TGF-β信号的传导。此外,SMAD7还能招募E3泛素连接酶(如SMURF1或SMURF2)促进TGF-β受体的泛素化和降解,进一步减弱信号传递。SMAD7在多种组织中表达,尤其在免疫调节、炎症反应和纤维化过程中发挥重要作用。SMAD7的突变或表达异常与多种疾病相关。例如,SMAD7的功能缺失突变可能导致TGF-β信号过度激活,促进纤维化疾病(如肝纤维化、肺纤维化)或癌症进展。相反,SMAD7的过表达可能抑制TGF-β的抗炎和免疫调节功能,与炎症性肠病(如克罗恩病)和某些自身免疫性疾病的发生有关。研究表明,SMAD7的表达水平在多种癌症中异常,可能影响肿瘤微环境和转移。在结肠癌中,SMAD7的过表达可能抑制TGF-β的抗增殖作用,促进肿瘤发展;而在某些情况下,SMAD7的缺失可能导致TGF-β信号过度激活,促进上皮-间质转化(EMT)和转移。SMAD7的调控具有组织特异性,其表达受多种因素影响,包括microRNAs(如miR-21)和表观遗传修饰。在基因治疗或药物开发中,靶向SMAD7可能成为调节TGF-β信号通路的策略,例如通过反义寡核苷酸抑制SMAD7表达来治疗炎症性肠病。SMAD家族成员的共性是它们都含有高度保守的MH1和MH2结构域,分别负责DNA结合和蛋白相互作用。SMAD7与其他I-SMADs(如SMAD6)的共性是它们能够负反馈调节TGF-β家族信号,防止信号过度激活。

The protein encoded by this gene is a nuclear protein that binds the E3 ubiquitin ligase SMURF2. Upon binding, this complex translocates to the cytoplasm, where it interacts with TGF-beta receptor type-1 (TGFBR1), leading to the degradation of both the encoded protein and TGFBR1. Expression of this gene is induced by TGFBR1. Variations in this gene are a cause of susceptibility to colorectal cancer type 3 (CRCS3). Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2010]

由该基因编码的蛋白质是结合的E3泛素连接酶SMURF2核蛋白质。结合后,这种复杂的易位到细胞质,在那里它与TGF-β受体1型(TGFBR1)相互作用,从而导致这两个所编码的蛋白质和TGFBR1的降解。这个基因的表达是通过TGFBR1诱导。这种基因变化是易感的原因大肠癌3型(CRCS3)。已发现该基因编码不同亚型的几个抄本变形。 [由RefSeq的,2010年6月提供]

SMAD7基因的碱基序列:[NCBI]
Loading Gene Browser...
SMAD7基因的碱基突变:           仅显示部分snp
rs884013       rs1052572       rs1316447       rs1873190       rs1873191       rs2337104       rs2337105       rs2337106       rs2337107       rs2337108       rs2337109       rs2337113       rs2878889       rs2878890       rs3736242       rs3764482       rs3809922      

SMAD7基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGACTGTCCAGATGCTGTG
59
GAAGTTGGGAATCTGAAAGCC
60
TACTCCAGATACCCGATGG
58
AGTTGGGAATCTGAAAGCC
58
AATTCCCAACTTCTTCTGGAG
58
TCTTCTCCTCCCAGTATGC
58
CTTCCCTCTTGTGTCCTCC
59
AAGAAGTTGGGAATCTGAGAGG
60
AAATTCCCAACTTCTTCTGGAG
59
CTTCTCCTCCCAGTATGCC
59
TACTCCAGATACCCGATGGA
59
GTTGGGAATCTGAAAGCCC
59
CTTCCCTCTTGTGTCCTCC
59
AGAAGTTGGGAATCTGAGAGG
59
AGACTGTCCAGATGCTGTG
59
AAGTTGGGAATCTGAAAGCC
59
ACTCCAGATACCCGATGGA
60
GTTGGGAATCTGAAAGCCC
59
AGACTGTCCAGATGCTGTG
59
GTTGGGAATCTGAAAGCCC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
FOS
SMAD7
Activation
HDAC1
SMAD7
Unknown
JUN
SMAD7
Activation
MTA1
SMAD7
Repression
SKIL
SMAD7
Repression
SMAD3
SMAD7
Repression
SMAD3
SMAD7
Unknown
SMAD4
SMAD7
Unknown
SMAD7
CDK1
Repression
SMAD7
CDKN1A
Repression

SMAD7基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SMAD7基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005622
K7EKF0 (UniProtKB)
IEA
GO:0006355
K7EKF0 (UniProtKB)
IEA
GO:0000122
O15105 (UniProtKB)
IDA
GO:0001657
O15105 (UniProtKB)
IEA
GO:0003700
O15105 (UniProtKB)
IEA
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005515
O15105 (UniProtKB)
IPI
GO:0005518
O15105 (UniProtKB)
IEA
GO:0005634
O15105 (UniProtKB)
IDA
GO:0005634
O15105 (UniProtKB)
IDA
GO:0005634
O15105 (UniProtKB)
IDA
GO:0005654
O15105 (UniProtKB)
IDA
GO:0005654
O15105 (UniProtKB)
TAS
GO:0005654
O15105 (UniProtKB)
TAS
GO:0005654
O15105 (UniProtKB)
TAS
GO:0005654
O15105 (UniProtKB)
TAS
GO:0005667
O15105 (UniProtKB)
IEA
GO:0005730
O15105 (UniProtKB)
IDA
GO:0005737
O15105 (UniProtKB)
IDA
GO:0005737
O15105 (UniProtKB)
IDA
GO:0005737
O15105 (UniProtKB)
IDA
GO:0005813
O15105 (UniProtKB)
IDA
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005829
O15105 (UniProtKB)
TAS
GO:0005886
O15105 (UniProtKB)
IDA
GO:0006351
O15105 (UniProtKB)
IEA
GO:0007179
O15105 (UniProtKB)
IEA
GO:0008013
O15105 (UniProtKB)
IPI
GO:0010717
O15105 (UniProtKB)
IMP
GO:0010719
O15105 (UniProtKB)
IC
GO:0010719
O15105 (UniProtKB)
TAS
GO:0010801
O15105 (UniProtKB)
IDA
GO:0010944
O15105 (UniProtKB)
IDA
GO:0017015
O15105 (UniProtKB)
IC
GO:0022409
O15105 (UniProtKB)
IDA
GO:0030336
O15105 (UniProtKB)
TAS
GO:0030509
O15105 (UniProtKB)
TAS
GO:0030512
O15105 (UniProtKB)
IDA
GO:0030512
O15105 (UniProtKB)
IDA
GO:0030512
O15105 (UniProtKB)
IDA
GO:0030512
O15105 (UniProtKB)
TAS
GO:0030512
O15105 (UniProtKB)
TAS
GO:0030512
O15105 (UniProtKB)
TAS
GO:0030514
O15105 (UniProtKB)
IDA
GO:0030617
O15105 (UniProtKB)
IDA
GO:0031397
O15105 (UniProtKB)
IDA
GO:0031398
O15105 (UniProtKB)
IDA
GO:0031625
O15105 (UniProtKB)
IPI
GO:0032436
O15105 (UniProtKB)
IDA
GO:0032925
O15105 (UniProtKB)
IDA
GO:0033137
O15105 (UniProtKB)
IDA
GO:0034333
O15105 (UniProtKB)
IMP
GO:0034616
O15105 (UniProtKB)
IEP
GO:0034629
O15105 (UniProtKB)
IDA
GO:0034713
O15105 (UniProtKB)
IPI
GO:0035556
O15105 (UniProtKB)
IEA
GO:0043234
O15105 (UniProtKB)
IDA
GO:0043433
O15105 (UniProtKB)
IDA
GO:0044212
O15105 (UniProtKB)
IDA
GO:0045944
O15105 (UniProtKB)
TAS
GO:0046872
O15105 (UniProtKB)
IEA
GO:0048185
O15105 (UniProtKB)
IPI
GO:0048844
O15105 (UniProtKB)
ISS
GO:0050821
O15105 (UniProtKB)
IDA
GO:0051444
O15105 (UniProtKB)
IDA
GO:0055010
O15105 (UniProtKB)
ISS
GO:0055117
O15105 (UniProtKB)
ISS
GO:0060373
O15105 (UniProtKB)
IC
GO:0060389
O15105 (UniProtKB)
ISS
GO:0060394
O15105 (UniProtKB)
IDA
GO:0060394
O15105 (UniProtKB)
TAS
GO:0060412
O15105 (UniProtKB)
ISS
GO:0070411
O15105 (UniProtKB)
IPI
GO:0071560
O15105 (UniProtKB)
IMP
GO:0005913
O15105 (UniProtKB)
IDA
GO:0016342
O15105 (UniProtKB)
IDA

可能调控 SMAD7基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Colorectal Cancer 0.162367471 48 16 BeFree_GAD_GWASCAT
Colorectal Neoplasms 0.132192478 4 1 CTD_human_GAD_LHGDN
COLORECTAL CANCER, SUSCEPTIBILITY TO, 3 0.12 0 0 CLINVAR
Pulmonary Fibrosis 0.12 1 0 CTD_human
Paraquat lung 0.12 1 0 CTD_human
Nephritis 0.08 1 0 RGD
Colorectal Carcinoma 0.009229024 34 15 BeFree
melanoma 0.005720142 2 0 BeFree_LHGDN
Neoplasm Metastasis 0.005438769 11 0 BeFree_LHGDN
Colonic Neoplasms 0.004734064 2 0 GAD

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