RPSA (ribosomal protein SA)

symbol:
RPSA
locus group:
protein-coding gene
location:
3p22.1
gene_family:
alias symbol:
LRP|37LRP|p40|SA
alias name:
None
entrez id:
3921
ensembl gene id:
ENSG00000168028
ucsc gene id:
uc003cjp.4
refseq accession:
NM_002295
hgnc_id:
HGNC:6502
approved reserved:
1992-06-03
3p22.1
基因染色体位置图

RPSA(核糖体蛋白SA)是一种重要的核糖体蛋白,属于核糖体蛋白家族,该家族成员普遍参与核糖体的组装和蛋白质的翻译过程。RPSA基因编码的蛋白质是40S核糖体亚基的组成部分,在蛋白质合成中发挥关键作用。除了参与翻译,RPSA还作为层粘连蛋白受体(LAMR1)在细胞表面表达,参与细胞粘附、信号传导和病毒感染等过程。RPSA的突变可能导致核糖体功能异常,影响蛋白质合成效率,进而引发核糖体病(如Diamond-Blackfan贫血)或与癌症发展相关。研究表明,RPSA在某些肿瘤(如乳腺癌、肝癌)中过表达,可能通过促进细胞增殖、迁移和侵袭参与肿瘤进展。降低RPSA表达可能抑制肿瘤生长,但同时也可能影响正常细胞的蛋白质合成。RPSA还参与病毒感染过程,如登革热病毒和SARS-CoV-2利用其作为受体进入细胞。该基因属于核糖体蛋白基因家族,该家族成员通常高度保守,在物种间具有相似的结构和功能,主要参与维持核糖体稳定性和翻译调控。RPSA的多功能性使其成为研究癌症、病毒感染和核糖体相关疾病的重要靶点。

Laminins, a family of extracellular matrix glycoproteins, are the major noncollagenous constituent of basement membranes. They have been implicated in a wide variety of biological processes including cell adhesion, differentiation, migration, signaling, neurite outgrowth and metastasis. Many of the effects of laminin are mediated through interactions with cell surface receptors. These receptors include members of the integrin family, as well as non-integrin laminin-binding proteins. This gene encodes a high-affinity, non-integrin family, laminin receptor 1. This receptor has been variously called 67 kD laminin receptor, 37 kD laminin receptor precursor (37LRP) and p40 ribosome-associated protein. The amino acid sequence of laminin receptor 1 is highly conserved through evolution, suggesting a key biological function. It has been observed that the level of the laminin receptor transcript is higher in colon carcinoma tissue and lung cancer cell line than their normal counterparts. Also, there is a correlation between the upregulation of this polypeptide in cancer cells and their invasive and metastatic phenotype. Multiple copies of this gene exist, however, most of them are pseudogenes thought to have arisen from retropositional events. Two alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

层粘连蛋白,一个家庭的细胞外基质糖蛋白,是基底膜的主要非胶原成分。他们已牵涉在多种生物学过程,包括细胞粘着,分化,迁移,信令,神经突向外生长和转移。许多的层粘连蛋白的作用是通过与细胞表面受体的相互作用介导的。这些受体包括整联蛋白家族的成员,以及非整层粘连蛋白结合蛋白。这个基因编码的高亲和力,非整联蛋白家族,层粘连蛋白受体1该受体被不同地称为67 kD的层粘连蛋白受体,37 kD的层粘连蛋白受体的前体(37LRP)和p40核糖体相关蛋白。层粘连蛋白受体1的氨基酸序列在进化过程中高度保守,提示键生物学功能。已经观察到层粘连蛋白受体转录物的水平是在结肠癌组织和肺癌细胞系比它们的正常对应更高。此外,还有在癌细胞这种多肽的上调和它们的侵袭和转移表型之间的相关性。该基因的多个副本存在,但是,他们大多是认为从retropositional事件出现假。已发现此基因的两个编码相同蛋白质可变剪接转录物变体。 [由RefSeq的,2008年7月提供]

RPSA基因的碱基序列:[NCBI]
Loading Gene Browser...
RPSA基因的碱基突变:           仅显示部分snp
rs2723       rs2724       rs2725       rs1318417       rs1392192       rs1472508       rs1803893       rs2077797       rs2077798       rs2077799       rs2133579       rs2173603       rs2269349       rs2269350       rs2276714       rs3772138       rs3772139      

RPSA基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CAGTGGGTTTGATGTGGTG
59
TTCAATCTCTTCAGGATCTCTG
57
GTTGTTCTGGATTCCCGTC
58
GAACTTAAGGACATCCTCCTC
57
ACAACAAGGGAGCTCACTC
59
TACAGATCAGGCATGACCTC
59
CCTGCTCAAATGAAGGATTCC
59
TTCATTTGCAGGACATCAAGG
59
CAGGAATACTGGCCAGAGG
59
AGTGAAGGTTCCAGGAGTG
59
CCAGGAATACTGGCCAGAG
59
AAGGTTCCAGGAGTGAAGC
59
ACAACAAGGGAGCTCACTC
59
ACAGATCAGGCATGACCTC
59
AAATGAAGGATTCCCGTCG
57
CTCCTCCTTCATTTGCAGG
58
GTTTGATGTGGTGGATGCT
58
TTCAATCTCTTCAGGATCTCTG
57
GTTGTTCTGGATTCCCGTC
58
CTCCTCCTTCATTTGCAGG
58
      尚未收录相关数据

RPSA基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

RPSA基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000028
A0A0C4DG17 (UniProtKB)
IEA
GO:0003735
A0A0C4DG17 (UniProtKB)
IEA
GO:0005055
A0A0C4DG17 (UniProtKB)
IEA
GO:0005604
A0A0C4DG17 (UniProtKB)
IEA
GO:0005634
A0A0C4DG17 (UniProtKB)
IEA
GO:0005886
A0A0C4DG17 (UniProtKB)
IEA
GO:0006412
A0A0C4DG17 (UniProtKB)
IEA
GO:0016337
A0A0C4DG17 (UniProtKB)
IEA
GO:0022627
A0A0C4DG17 (UniProtKB)
IEA
GO:0030855
A0A0C4DG17 (UniProtKB)
IEA
GO:0043025
A0A0C4DG17 (UniProtKB)
IEA
GO:0043236
A0A0C4DG17 (UniProtKB)
IEA
GO:0003735
C9J9K3 (UniProtKB)
IEA
GO:0006412
C9J9K3 (UniProtKB)
IEA
GO:0015935
C9J9K3 (UniProtKB)
IEA
GO:0003735
F8WD59 (UniProtKB)
IEA
GO:0006412
F8WD59 (UniProtKB)
IEA
GO:0015935
F8WD59 (UniProtKB)
IEA
GO:0000028
P08865 (UniProtKB)
IBA
GO:0000184
P08865 (UniProtKB)
TAS
GO:0000447
P08865 (UniProtKB)
IBA
GO:0000461
P08865 (UniProtKB)
IBA
GO:0001618
P08865 (UniProtKB)
IEA
GO:0003735
P08865 (UniProtKB)
IBA
GO:0005055
P08865 (UniProtKB)
IEA
GO:0005515
P08865 (UniProtKB)
IPI
GO:0005515
P08865 (UniProtKB)
IPI
GO:0005515
P08865 (UniProtKB)
IPI
GO:0005634
P08865 (UniProtKB)
TAS
GO:0005654
P08865 (UniProtKB)
TAS
GO:0005737
P08865 (UniProtKB)
TAS
GO:0005737
P08865 (UniProtKB)
IDA
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005829
P08865 (UniProtKB)
TAS
GO:0005886
P08865 (UniProtKB)
IDA
GO:0006364
P08865 (UniProtKB)
TAS
GO:0006407
P08865 (UniProtKB)
IBA
GO:0006412
P08865 (UniProtKB)
IBA
GO:0006412
P08865 (UniProtKB)
IC
GO:0006413
P08865 (UniProtKB)
TAS
GO:0006614
P08865 (UniProtKB)
TAS
GO:0007155
P08865 (UniProtKB)
IEA
GO:0016020
P08865 (UniProtKB)
IDA
GO:0019083
P08865 (UniProtKB)
TAS
GO:0022627
P08865 (UniProtKB)
IDA
GO:0030686
P08865 (UniProtKB)
IBA
GO:0043022
P08865 (UniProtKB)
IPI
GO:0043236
P08865 (UniProtKB)
IEA
GO:0044822
P08865 (UniProtKB)
IDA
GO:0046718
P08865 (UniProtKB)
IEA
GO:0070062
P08865 (UniProtKB)
IDA
GO:0070062
P08865 (UniProtKB)
IDA

可能调控 RPSA基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Splenic Hypoplasia 0.120271442 1 0 BeFree_ORPHANET
Neoplasm Invasiveness 0.12 1 0 CTD_human
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 (disorder) 0.08 0 0 MGD
Neoplasm Metastasis 0.004885954 18 0 BeFree
Lung Neoplasms 0.002995792 2 0 BeFree_LHGDN
Stomach Neoplasms 0.00272435 1 0 LHGDN
Leukemia, Myelocytic, Acute 0.002442977 9 0 BeFree
Malignant neoplasm of stomach 0.002171535 8 0 BeFree
Stomach Carcinoma 0.002171535 8 0 BeFree
Carcinoma of lung 0.001628651 6 0 BeFree

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