NUP98 (nucleoporin 98 and 96 precursor)

symbol:
NUP98
locus group:
protein-coding gene
location:
11p15.4
gene_family:
alias symbol:
NUP96|Nup98-Nup96|Nup98-96|NUP196
alias name:
Nuclear pore complex protein Nup98…
entrez id:
4928
ensembl gene id:
ENSG00000110713
ucsc gene id:
uc001lyh.3
refseq accession:
NM_016320
hgnc_id:
HGNC:8068
approved reserved:
1997-07-04
11p15.4
基因染色体位置图

NUP98(核孔蛋白98)是一种重要的核孔复合体蛋白,属于核孔蛋白(NUP)基因家族。该家族成员共同参与核孔复合体的形成,负责调控细胞核与细胞质之间的物质运输,包括RNA和蛋白质的转运。NUP98基因位于人类染色体11p15.4,编码的蛋白包含多个苯丙氨酸-甘氨酸(FG)重复序列,这些序列在核转运过程中与转运受体相互作用,帮助分子选择性通过核孔。NUP98在细胞分裂、基因表达调控和染色质组织中也发挥关键作用。NUP98的突变或异常表达与多种疾病相关,尤其是血液系统恶性肿瘤,如急性髓系白血病(AML)和骨髓增生异常综合征(MDS)。常见的致病机制是NUP98与其他基因(如HOXA9、PMX1等)发生融合,形成致癌融合蛋白,干扰正常造血分化并促进白血病发生。NUP98过表达可能破坏核转运平衡,影响细胞周期调控和凋亡,导致基因组不稳定;而表达降低则可能损害核质运输功能,影响细胞存活。此外,NUP98还参与病毒感染过程,某些病毒利用其FG重复区进入细胞核。该基因的突变或缺失在小鼠模型中会导致胚胎致死,表明其在发育中不可或缺。NUP98基因家族成员通常具有保守的FG重复结构域,并在核孔复合体组装和功能中发挥协同作用。

Signal-mediated nuclear import and export proceed through the nuclear pore complex (NPC), which is comprised of approximately 50 unique proteins collectively known as nucleoporins. The 98 kDa nucleoporin is generated through a biogenesis pathway that involves synthesis and proteolytic cleavage of a 186 kDa precursor protein. This cleavage results in the 98 kDa nucleoporin as well as a 96 kDa nucleoporin, both of which are localized to the nucleoplasmic side of the NPC. Rat studies show that the 98 kDa nucleoporin functions as one of several docking site nucleoporins of transport substrates. The human gene has been shown to fuse to several genes following chromosome translocations in acute myelogenous leukemia (AML) and T-cell acute lymphocytic leukemia (T-ALL). This gene is one of several genes located in the imprinted gene domain of 11p15.5, an important tumor-suppressor gene region. Alterations in this region have been associated with the Beckwith-Wiedemann syndrome, Wilms tumor, rhabdomyosarcoma, adrenocortical carcinoma, and lung, ovarian, and breast cancer. Alternative splicing of this gene results in several transcript variants; however, not all variants have been fully described. [provided by RefSeq, May 2010]

信号介导核进口和出口通过核孔复合物(NPC),它是由统称为核孔蛋白大约50个独特的蛋白质进行。 98 kDa的核孔蛋白是通过涉及合成和186 kDa的前体蛋白的蛋白水解切割一个生物合成途径产生。这两者在98 kDa的核孔蛋白这种分裂的结果,以及一个96 kDa的核孔蛋白,定位于全国的核质的一面。鼠的研究表明,在98 kDa的核孔蛋白功能的传输衬底的若干停靠站点核孔蛋白之一。人类基因已经显示熔合到下面的急性骨髓性白血病(AML)和T-细胞急性淋巴细胞性白血病(T-ALL)染色体易位的几个基因。该基因是位于11p15.5的印迹基因域,一个重要的肿瘤抑制基因区的几个基因中的一个。在这一区域的改变已与贝克威思-威德曼综合征,肾母细胞瘤,横纹肌肉瘤,肾上腺皮质癌和肺癌,卵巢癌和乳腺癌有关。在几个转录变异体本基因的结果的选择性剪接;然而,并非所有的变体已被充分地描述。 [由RefSeq的,2010年5月提供]

NUP98基因的碱基序列:[NCBI]
Loading Gene Browser...
NUP98基因的碱基突变:           仅显示部分snp
rs6578411       rs138052155       rs143192527       rs148265174       rs149081028       rs185167425       rs189463410       rs192460650       rs369161940       rs530876048       rs534533556       rs535524767       rs540496460       rs544693097       rs558042330       rs562295045       rs562926605      

NUP98基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGTCTCTGTGCAAGAATGTC
58
GACTCAGTTAGGCAAGAGGA
59
AACATAAGTACCAAGCACCA
57
ATCCTCTAAACGAAGTTCCTC
57
CATCTTTGCTCTGTTGGCT
59
GGAGCACACGTTTATTTGC
58
GGTTCAAGCGATTCTCCTG
59
AGAGCAAGACGATGATCCC
59
TGAGTAGCTGGGATTACAGG
59
TGGCTACCCACAAACTGAG
60
CAACTCAGGCATACGTGAG
58
CTCTTTAGCCCAAGATTCAGG
59
GTCACATCTCTTTGATGGGC
59
TTCTTAATGCTCTTCTTGGGC
59
CAGAAGCACAAATTGTGAAGC
59
TGTCAAGCTCCTTCAGGTG
60
CCATCTATGGATGACCTTGC
58
AACCATAACCTTTCCGACC
57
ATTTGGAACAGCTCTTGGTG
59
AAAGGCTCCTGTACCAAGAG
60
      尚未收录相关数据

NUP98基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

NUP98基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000059
P52948 (UniProtKB)
NAS
GO:0000973
P52948 (UniProtKB)
IBA
GO:0003723
P52948 (UniProtKB)
IBA
GO:0005215
P52948 (UniProtKB)
TAS
GO:0005487
P52948 (UniProtKB)
IBA
GO:0005515
P52948 (UniProtKB)
IPI
GO:0005515
P52948 (UniProtKB)
IPI
GO:0005515
P52948 (UniProtKB)
IPI
GO:0005515
P52948 (UniProtKB)
IPI
GO:0005635
P52948 (UniProtKB)
IDA
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005635
P52948 (UniProtKB)
TAS
GO:0005643
P52948 (UniProtKB)
NAS
GO:0005643
P52948 (UniProtKB)
IDA
GO:0005643
P52948 (UniProtKB)
IDA
GO:0005643
P52948 (UniProtKB)
IDA
GO:0005654
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0005829
P52948 (UniProtKB)
TAS
GO:0006260
P52948 (UniProtKB)
IMP
GO:0006405
P52948 (UniProtKB)
IBA
GO:0006406
P52948 (UniProtKB)
TAS
GO:0006406
P52948 (UniProtKB)
TAS
GO:0006406
P52948 (UniProtKB)
TAS
GO:0006409
P52948 (UniProtKB)
TAS
GO:0006913
P52948 (UniProtKB)
TAS
GO:0006999
P52948 (UniProtKB)
NAS
GO:0007062
P52948 (UniProtKB)
TAS
GO:0007077
P52948 (UniProtKB)
TAS
GO:0008139
P52948 (UniProtKB)
IBA
GO:0010827
P52948 (UniProtKB)
TAS
GO:0016032
P52948 (UniProtKB)
TAS
GO:0016925
P52948 (UniProtKB)
TAS
GO:0016925
P52948 (UniProtKB)
TAS
GO:0016925
P52948 (UniProtKB)
TAS
GO:0017056
P52948 (UniProtKB)
IMP
GO:0017056
P52948 (UniProtKB)
NAS
GO:0019083
P52948 (UniProtKB)
TAS
GO:0031047
P52948 (UniProtKB)
TAS
GO:0031080
P52948 (UniProtKB)
NAS
GO:0031080
P52948 (UniProtKB)
IDA
GO:0031965
P52948 (UniProtKB)
IDA
GO:0031965
P52948 (UniProtKB)
IDA
GO:0031965
P52948 (UniProtKB)
IDA
GO:0031965
P52948 (UniProtKB)
IDA
GO:0034398
P52948 (UniProtKB)
IBA
GO:0034399
P52948 (UniProtKB)
IDA
GO:0034399
P52948 (UniProtKB)
IDA
GO:0042405
P52948 (UniProtKB)
IDA
GO:0044614
P52948 (UniProtKB)
IBA
GO:0044615
P52948 (UniProtKB)
IDA
GO:0051292
P52948 (UniProtKB)
IMP
GO:0075733
P52948 (UniProtKB)
TAS
GO:1900034
P52948 (UniProtKB)
TAS
GO:0000776
P52948 (UniProtKB)
IDA

可能调控 NUP98基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Leukemia, Myelocytic, Acute 0.160242918 83 0 BeFree_CTD_human_LHGDN
MYELODYSPLASTIC SYNDROME 0.008977445 14 0 BeFree_LHGDN
leukemia 0.00842463 22 0 BeFree_LHGDN
Leukemogenesis 0.005157396 19 0 BeFree
Myeloid Leukemia, Chronic 0.004614512 17 0 BeFree
Myeloid Leukemia 0.004353001 6 0 BeFree_LHGDN
Preleukemia 0.003800186 14 0 BeFree
Hematologic Neoplasms 0.003528744 13 0 BeFree
HIV Infections 0.00272435 1 0 LHGDN
Acute leukemia 0.002442977 9 0 BeFree

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