CLCA2 (chloride channel accessory 2)

symbol:
CLCA2
locus group:
protein-coding gene
location:
1p22.3
gene_family:
Chloride channel accessory
alias symbol:
CLCRG2
alias name:
None
entrez id:
9635
ensembl gene id:
ENSG00000137975
ucsc gene id:
uc001dlr.5
refseq accession:
NM_006536
hgnc_id:
HGNC:2016
approved reserved:
1998-09-29
1p22.3
基因染色体位置图

CLCA2(钙激活氯通道辅助蛋白2)属于CLCA基因家族,该家族成员编码的蛋白质主要参与调节钙激活的氯离子通道功能,在维持上皮细胞离子平衡、黏液分泌和细胞黏附中发挥重要作用。CLCA2蛋白主要在乳腺、皮肤、肺和肠道等上皮组织中表达,其功能与细胞增殖、分化和屏障完整性密切相关。研究表明CLCA2通过调控细胞外基质蛋白(如层粘连蛋白)的表达影响细胞间黏附,并在肿瘤转移抑制中起作用,其表达下调与乳腺癌、肺癌等多种癌症的侵袭性增强相关。CLCA基因家族的共性在于它们编码的蛋白质均含有保守的锌结合位点和VWA结构域,能够调节跨膜氯离子传导,但各成员具有组织特异性表达模式。当CLCA2过表达时,可增强上皮细胞间的黏附力,抑制肿瘤细胞迁移;而表达降低则会导致上皮屏障功能受损,促进肿瘤转移。CLCA2的突变可能破坏其正常功能,导致上皮组织稳态失衡,与特应性皮炎、哮喘等炎症性疾病的发生发展相关。值得注意的是,CLCA2在乳腺发育过程中呈现动态表达变化,提示其可能参与激素调控的生理过程。最新研究还发现CLCA2与EGFR信号通路存在交叉作用,可能通过影响受体酪氨酸激酶活性参与细胞命运决定。

The protein encoded by this gene belongs to the calcium sensitive chloride conductance protein family. To date, all members of this gene family map to the same site on chromosome 1p31-p22 and share high degrees of homology in size, sequence and predicted structure, but differ significantly in their tissue distributions. Since this protein is expressed predominantly in trachea and lung, it is suggested to play a role in the complex pathogenesis of cystic fibrosis. It may also serve as adhesion molecule for lung metastatic cancer cells, mediating vascular arrest and colonization, and furthermore, it has been implicated to act as a tumor suppressor gene for breast cancer. [provided by RefSeq, Jul 2008]

None

CLCA2基因的碱基序列:[NCBI]
Loading Gene Browser...
CLCA2基因的碱基突变:           仅显示部分snp
rs16908       rs883200       rs956499       rs969786       rs969787       rs969788       rs969789       rs969790       rs1052465       rs1158505       rs1158506       rs1158833       rs1334138       rs1334142       rs1334143       rs1334144       rs1334145      

CLCA2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AAGAAAGGATTTGAGGTGGT
57
CTTATCATCTCCGCTGGTC
58
TGCATGTCAATCACTCTCC
58
CTGAATATTACCGTTTGCTGTG
58
CTCATTCTGCACATACAGCA
58
ATAACATCAGCACCTGGCT
59
ATTATCACGTCTTACAGGAGGT
59
CTACTGAAAGCATCAATCATGC
58
CAGCTAAGCTTAGAAGATTCGC
60
ATGGCCAAGGCAATAAATCAG
59
CAACAATTCACTCCATTGCC
58
ACTTTAAACCTCCTGTAAGACG
58
GCATGTCAATCACTCTCCC
58
CTGAATATTACCGTTTGCTGTG
58
ACAGCTAAGCTTAGAAGATTCG
58
TGGCCAAGGCAATAAATCAG
59
TTTCATATCTGCCCACCAC
58
TTTCAACCACCTCAAATCCT
57
TCATTCTGCACATACAGCA
57
TATAACATCAGCACCTGGC
57
      尚未收录相关数据

CLCA2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CLCA2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004222
Q9UQC9 (UniProtKB)
TAS
GO:0005229
Q9UQC9 (UniProtKB)
IEA
GO:0005254
Q9UQC9 (UniProtKB)
TAS
GO:0005576
Q9UQC9 (UniProtKB)
IEA
GO:0005634
Q9UQC9 (UniProtKB)
IDA
GO:0005886
Q9UQC9 (UniProtKB)
TAS
GO:0005887
Q9UQC9 (UniProtKB)
TAS
GO:0006508
Q9UQC9 (UniProtKB)
IEA
GO:0006810
Q9UQC9 (UniProtKB)
TAS
GO:0007155
Q9UQC9 (UniProtKB)
IEA
GO:0009925
Q9UQC9 (UniProtKB)
IEA
GO:0015276
Q9UQC9 (UniProtKB)
IEA
GO:0030054
Q9UQC9 (UniProtKB)
IDA
GO:0034220
Q9UQC9 (UniProtKB)
TAS
GO:0046872
Q9UQC9 (UniProtKB)
IEA
GO:1902476
Q9UQC9 (UniProtKB)
IEA

可能调控 CLCA2基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Crohn Disease 0.12 1 1 GWASCAT
Malignant neoplasm of breast 0.005819831 5 0 BeFree_GAD
Breast Carcinoma 0.001085767 4 0 BeFree
Mammary Neoplasms 0.000814326 3 0 BeFree
Neoplasm Metastasis 0.000814326 3 0 BeFree
Erythema Nodosum 0.000271442 1 0 BeFree
Adenocarcinoma of lung (disorder) 0.000271442 1 0 BeFree
Adenocarcinoma 0.000271442 1 0 BeFree
Squamous cell carcinoma 0.000271442 1 0 BeFree
Malignant neoplasm of prostate 0.000271442 1 0 BeFree

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