CDH5 (cadherin 5)

symbol:
CDH5
locus group:
protein-coding gene
location:
16q21
gene_family:
Major cadherins|CD molecules
alias symbol:
7B4|CD144
alias name:
VE-cadherin
entrez id:
1003
ensembl gene id:
ENSG00000179776
ucsc gene id:
uc002eom.5
refseq accession:
NM_001795
hgnc_id:
HGNC:1764
approved reserved:
1992-11-20
16q21
基因染色体位置图

CDH5基因编码钙黏蛋白5(Cadherin-5),也称为血管内皮钙黏蛋白(VE-cadherin),是一种主要表达于血管内皮细胞的钙依赖性细胞黏附分子。它属于钙黏蛋白基因家族(Cadherin superfamily),该家族成员以钙依赖性细胞间黏附为共性,参与组织形成和维持细胞极性。CDH5通过同源二聚体相互作用介导内皮细胞间的紧密连接,对血管屏障功能的维持、血管新生和胚胎血管发育至关重要。CDH5的胞内结构域与连环蛋白(如β-catenin和p120-catenin)结合,连接至细胞骨架,调控内皮细胞迁移和血管稳定性。突变或表达异常会导致血管通透性增加,与多种疾病相关,如遗传性出血性毛细血管扩张症(HHT)、肿瘤转移和炎症性疾病。CDH5过表达可能增强血管完整性但抑制血管新生,而低表达或功能缺失会破坏内皮连接,导致血管渗漏、水肿和病理性血管增生。在肿瘤中,CDH5下调可能促进肿瘤血管异常化和转移。该基因与CDH1(E-cadherin)等同家族成员共享保守的胞外钙结合重复序列,但具有组织特异性分布,CDH5专一调控血管内皮功能。研究还发现CDH5参与免疫细胞跨内皮迁移,与动脉粥样硬化等炎症过程相关。其表达受VEGF、Wnt等信号通路调控,是抗血管生成治疗的潜在靶点。

This gene is a classical cadherin from the cadherin superfamily and is located in a six-cadherin cluster in a region on the long arm of chromosome 16 that is involved in loss of heterozygosity events in breast and prostate cancer. The encoded protein is a calcium-dependent cell-cell adhesion glycoprotein comprised of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail. Functioning as a classic cadherin by imparting to cells the ability to adhere in a homophilic manner, the protein may play an important role in endothelial cell biology through control of the cohesion and organization of the intercellular junctions. An alternative splice variant has been described but its full length sequence has not been determined. [provided by RefSeq, Jul 2008]

这个基因是从钙粘蛋白家族一个经典钙粘蛋白,位于六钙粘蛋白簇中的区域上,其参与在乳腺癌和前列腺癌的杂合的事件损失16号染色体的长臂。所编码的蛋白质是由五个细胞外钙粘蛋白重复序列??,一个跨膜区和一个高度保守的胞质尾钙依赖性细胞 - 细胞粘着的糖蛋白。通过赋予细胞在嗜同的方式粘附的能力充当一个经典钙粘蛋白,该蛋白质可通过细胞间连接的凝聚力和组织的控制起到内皮细胞生物学中起重要作用。备选剪接变体已被描述,但它的全长序列尚未确定。 [由RefSeq的,2008年7月提供]

CDH5基因的碱基序列:[NCBI]
Loading Gene Browser...
CDH5基因的碱基突变:           仅显示部分snp
rs1049970       rs1063438       rs1063439       rs1073584       rs1076019       rs1076020       rs1077318       rs1130844       rs1865977       rs1865978       rs1968502       rs1972838       rs1972839       rs1978815       rs2289148       rs2304527       rs2304528      

CDH5基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GCCATCGATAATTCTGGACG
59
CCACCACGATCTCATACCT
59
GTCTCCATATGTGAGTCCTGG
60
GGAACAGATCTGCAACTCCT
60
ATTGGATTTGGAACCAGATGC
59
ACGCTTGACTTGATCTTGC
58
TTCTACCACTTCCAGCTGG
59
GTGAGGGTAAAGTTGTTCTCAG
59
ATTGGATTTGGAACCAGATGC
59
ACGCTTGACTTGATCTTGC
59
ACCTTCTGCGAGGATATGG
59
ATGAGCAGGGTGATCACTG
60
TACCACTTCCAGCTGAAGG
59
GATGGAGTATCCAATGCTATGC
59
ATTGGATTTGGAACCAGATGC
59
ACGCTTGACTTGATCTTGC
59
AAGAATGCCAAGTACCTGCT
60
CTCATCTGGGTCACGTCTC
60
TCACCCAGACCAAGTACAC
59
GGGTCCTCAACAAACAGAG
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
ERG
CDH5
Unknown
KLF4
CDH5
Activation

CDH5基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CDH5基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001955
B4DTR2 (UniProtKB)
IEA
GO:0005509
B4DTR2 (UniProtKB)
IEA
GO:0007156
B4DTR2 (UniProtKB)
IEA
GO:0016021
B4DTR2 (UniProtKB)
IEA
GO:0001955
H3BPG1 (UniProtKB)
IEA
GO:0005509
H3BPG1 (UniProtKB)
IEA
GO:0007156
H3BPG1 (UniProtKB)
IEA
GO:0016020
H3BPG1 (UniProtKB)
IEA
GO:0001955
H3BR11 (UniProtKB)
IEA
GO:0005509
H3BR11 (UniProtKB)
IEA
GO:0007155
H3BR11 (UniProtKB)
IEA
GO:0001955
H3BR64 (UniProtKB)
IEA
GO:0005509
H3BR64 (UniProtKB)
IEA
GO:0007155
H3BR64 (UniProtKB)
IEA
GO:0005509
I3L1J2 (UniProtKB)
IEA
GO:0005886
I3L1J2 (UniProtKB)
IEA
GO:0007156
I3L1J2 (UniProtKB)
IEA
GO:0016021
I3L1J2 (UniProtKB)
IEA
GO:0001955
P33151 (UniProtKB)
IEA
GO:0005102
P33151 (UniProtKB)
IPI
GO:0005509
P33151 (UniProtKB)
IEA
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005515
P33151 (UniProtKB)
IPI
GO:0005886
P33151 (UniProtKB)
TAS
GO:0005886
P33151 (UniProtKB)
TAS
GO:0005886
P33151 (UniProtKB)
TAS
GO:0005911
P33151 (UniProtKB)
IDA
GO:0005911
P33151 (UniProtKB)
IDA
GO:0005911
P33151 (UniProtKB)
IDA
GO:0005911
P33151 (UniProtKB)
IDA
GO:0005912
P33151 (UniProtKB)
IEA
GO:0005923
P33151 (UniProtKB)
IEA
GO:0007043
P33151 (UniProtKB)
IMP
GO:0007156
P33151 (UniProtKB)
IEA
GO:0007179
P33151 (UniProtKB)
IDA
GO:0008013
P33151 (UniProtKB)
IPI
GO:0008285
P33151 (UniProtKB)
IEA
GO:0009897
P33151 (UniProtKB)
IEA
GO:0009986
P33151 (UniProtKB)
IDA
GO:0016020
P33151 (UniProtKB)
TAS
GO:0016021
P33151 (UniProtKB)
IEA
GO:0016337
P33151 (UniProtKB)
IEA
GO:0019903
P33151 (UniProtKB)
IEA
GO:0030054
P33151 (UniProtKB)
ISS
GO:0034332
P33151 (UniProtKB)
TAS
GO:0044325
P33151 (UniProtKB)
IPI
GO:1903142
P33151 (UniProtKB)
IMP
GO:2000114
P33151 (UniProtKB)
IMP

可能调控 CDH5基因的相关microRNA:     

Reactome

MINT

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Mammary Neoplasms 0.1254487 3 0 CTD_human_LHGDN
Colorectal Neoplasms 0.12 1 0 CTD_human
Biliary cirrhosis 0.12 1 0 CTD_human
No-Reflow Phenomenon 0.12 1 0 CTD_human
melanoma 0.003538676 4 0 BeFree_LHGDN
Breast Carcinoma 0.001085767 4 0 BeFree
Malignant neoplasm of breast 0.001085767 4 0 BeFree
Endocrine System Diseases 0.000271442 1 0 BeFree
Central neuroblastoma 0.000271442 1 0 BeFree
Adenoid Cystic Carcinoma 0.000271442 1 0 BeFree

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